Dear experts,
Based on my knowledge, all image folders should be within subject_dir for
qdec process.
But, my data are so huge to be included in this directory in my default
setting.
Do you have any idea to change qdec path by which qdec can import image
files in external hard drive or other bigger
Hi Freesurferteam,
For some of my subjects I get an error when I try to perform my analyses,
because the mcprextreg file is missing.
It is not apparent to my why this file is missing for some of my subjects,
while it is there for all the other subjects.
Also, there is one subject for which the
Thank you very much, now it is working!
The backslash was there but there was no space just after the .dat
I report below the final commands that I have used in case somebody else
might find it useful.
Thanks again!
mris_preproc --target fsaverage --hemi lh \
--iv ${SUBJECTS_DIR}/sub01/stats/con_0
Can you send the log files for those subjects? You will find them in the
log folder of the project folder. You will see one for preproc and one
for selxavg3
On 11/15/2017 11:04 AM, Christina Pressl wrote:
> /Hi Freesurferteam, /
> /For some of my subjects I get an error when I try to perform my
You can just
setenv SUBJECTS_DIR /path/to/your/big/disk
On 11/15/2017 04:06 AM, 박경일 wrote:
> Dear experts,
> Based on my knowledge, all image folders should be within subject_dir
> for qdec process.
> But, my data are so huge to be included in this directory in my
> default setting.
> Do you
Sorry for the delay. First run mni152reg for each subject (should take
only a few min, but needs FSL I think). Then run
mri_label2vol --aparc+aseg --temp MNI152_2mm.nii.gz --reg
$SUBJECTS_DIR/subject/mri/transforms/reg.mni152.2mm.lta --o
aparc+aseg.subject.mni152_2mm.nii.gz
On 11/14/2017 06
Hi Carl,
How many lines of text exist in your license file?
Andrew
On Nov 9, 2017, at 8:18 AM, Carl Anderson
mailto:remfr...@gmail.com>> wrote:
Hi Everyone,
I'm running freesurfer-Darwin-OSX-dev-20171107-ec5ce3a
I seem to get the line "error parsing license file, expected 4 values"
occuring fr
Hi Andrew,
Looks like only 3 lines.
I'll see if I can locate a back up.
Thanks,
Carl
On Wed, Nov 15, 2017 at 3:06 PM, Hoopes, Andrew
wrote:
> Hi Carl,
>
> How many lines of text exist in your license file?
>
> Andrew
>
> On Nov 9, 2017, at 8:18 AM, Carl Anderson wrote:
>
> Hi Everyone,
> I'm
Dear Experts,
I have extracted mean LGI values for each ROI using mri_segstats --annot SUBJ
rh aparc --i $SUBJECTS_DIR/SUBJ/surf/rh.pial_lgi --sum lh.aparc.pial_lgi.stats
For the next step, I am attempting to combine them into one table, and am
trying to use the aparcstats2table function. Does
Hi, Dr Greve
I tried following command
setenv SUBJECTS_DIR /mnt/data2 (data2 is a mounted disk)
the result is
bash: setenv: command not found
what is wrong?
Kyung
2017-11-16 4:57 GMT+09:00 Douglas N Greve :
> You can just
>
> setenv SUBJECTS_DIR /path/to/your/big/disk
>
>
>
>
> On 11/15/20
use
export SUBJECTS_DIR=/mnt/data2
On 11/15/2017 05:48 PM, 박경일 wrote:
> Hi, Dr Greve
> I tried following command
>
> setenv SUBJECTS_DIR /mnt/data2 (data2 is a mounted disk)
>
> the result is
>
> bash: setenv: command not found
> what is wrong?
>
> Kyung
>
>
>
>
> 2017-11-16 4:57 GMT+09:00 Dougl
Hello,
I am using optseq to optimize a new task. I have been playing around with
the examples they have on the documentation. What I can't find is
information on how to set up the trial structure when 1 trial is comprised
of 3 different stimuli types:
(choice 3sec --> effort (hard or easy) 3 sec -
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