Dear freesurfer experts,
I am wring to ask a stupid question, which I did not find the answer in
the mailing list.
I am going to run stats on the thickness data as described in the tutorial,
do I have to run separately for each hemisphere? If I am not wrong, we have
to specify the hemi in the da
Thanks for your reply Douglas.
Below is the data I have in my gtm.stats.dat file.
12 Left-Cerebral-White-Matter wm13878965391.648
0.858 0.1584
27 Left-Cerebellum-White-Matterwm 9431 5373.205
0.976 0.2046
3
Hi team,
Could anyone please tell how to create the time.dat file in the
Kinetic Modelling MRTM1 step
mri_glmfit --y km.hb.tac.nii.gz --mrtm1 km.ref.tac.dat time.dat --o mrtm1
--no-est-fwhm --nii.gz
Regards,
Janani
::DISCLAIMER::
-
Hi Martin,
Thanks for your suggestion, I will try rerunning the base from scratch to see
if this makes a difference. With regards to the base and time-point IDs, those
included in the files I sent you were actually not the IDs we use. I did a find
and replace to remove our actual IDs in case t
Hi Emma,
Thanks for your reply. I just tried running the recon-all process from the
beginning using the -all flag and it seems to have fixed whatever the error was
and the processing completed successfully.
Kind regards,
Bronwyn Overs
Research Assistant
Neuroscience Research Australia
Margarete
