Hello Bruce,
Our Psychology program allows a double major in Clinical Science and
Cognitive Neuroscience. Please have her contact me if she is interested.
There are excellent faculty in both programs and it is highly
collaborative across the two programs, so lots of opportunity for
training in
Thank you, Doug.
Regards
MV
On Fri, Oct 28, 2016 at 8:46 AM, Douglas Greve
wrote:
> Using perm will certainly avoid a lot of questions. You should still use
> the --2spaces. You changed the threshold from 2.3 to 1.3. This threshold is
> arbitrary, you don't necessarily need/want a lower thresho
Hi Antonin,
almost,
you need to use the existing transforms from the base (when the T1 template
get’s created) and apply these to the co-registered T2 of each time point. In
recon-all base code you will find a mi_robust_template call that takes existing
lta transforms for each time points an
Hi Tim,
yes, in the 2-stage approach, you first compute the slope per subject (e.g.
mm/year thinning or q mm per year volume loss) and then do a regular GLM for
each subject. For that the co-variates need to be fixed per subject. The
long_qdec_table command below averages the covers for you. Yo
Hi Tamara,
if you have time and only few subjects, I would recommend to look at all those.
For a large study it becomes difficult.
Just open the base and both time points on top to see if they all align and if
the base looks OK.
We also usually recommend to check the surface in base, but if y
Hi Tamara,
1. brainmask.mgz
2. yes, as you will get your final measures from the long output stats. Take a
look at how aseg edits are done in the regular cross stream. In long it would
work the same (just with passing -long and then instead of -all you just do the
last steps to recompute the s
Hi Tom,
Could be the qdec table has weird characters.
Try with a simplified table (only a few rows, created in a text editor from
scratch, space separated).
best, Martin
> On Oct 12, 2016, at 11:59 PM, tom parker wrote:
>
> Dear FreeSurfers,
>
> I've been trying to run a longitudinal cort
Quinn,
Could be that the table has any strange character in it (e.g. strange white
space etc. )
Try to create a table in a simple text editor by typing the header line and the
first 1 or two rows (space separated). If it can read that, then it is probably
the format of your table.
Best, Mar
