Re: [Freesurfer] Export value for each vertex in mgh file

2015-05-16 Thread Bruce Fischl
Hi Kai you can load mgh files into matlab using load_mgh - is that sufficient for what you want to do? cheers Bruce On Sat, 16 May 2015, LiuKai wrote: > Hi dear freesurfer expert, > Is there any command which can be used to export the value of each vertex of > a mgh file (e.g., lh.thickness.fsa

[Freesurfer] Segmenting the olfactory bulb

2015-05-16 Thread Elijah Mak
Hello, Is there a way to segment and extract volumes of the olfactory bulb in Freesurfer based on T1-MPRAGE? Cheers. Best Wishes, Elijah -- Elijah Mak, Gates Scholar PhD Candidate *|* Psychiatry University of Cambridge Trinity College, Cambridge, CB2 1TQ __

Re: [Freesurfer] Freesurfer Digest, Vol 135, Issue 23

2015-05-16 Thread LiuKai
y, Massachusetts General Hospital >Dept. of Neurology, Massachusetts General Hospital > Research Affiliate >Computer Science and Artificial Intelligence Lab, >Dept. of Electrical Engineering and Computer Science, >Massachusetts Institute of Technology > > A.A.Mart

Re: [Freesurfer] Freesurfer Digest, Vol 135, Issue 23

2015-05-16 Thread Bruce Fischl
usetts General Hospital > Research Affiliate > Computer Science and Artificial Intelligence Lab, > Dept. of Electrical Engineering and Computer Science, > Massachusetts Institute of Technology > > A.A.Martinos Center for Biomedical Imaging > 149 Thirteenth Street, Suite 2301

Re: [Freesurfer] dt_recon

2015-05-16 Thread Pedro Rosa - GMail
Thanks, Doug! Pedro Rosa On Monday, May 11, 2015 at 6:51 PM, Douglas N Greve wrote: > It sounds like you did the right thing. > > On 05/10/2015 02:41 PM, Pedro Rosa - GMail wrote: > > Dear developers, > > I am running an analysis with dt_recon, and it seems that my DWI files > > are organize

[Freesurfer] beta value

2015-05-16 Thread Xiaomin Yue
Hi, During the processing of functional data, can fsfast generate outputs of the significants for each beta values modeled in the design matrix? Thanks,XIaomin___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu