Re: [Freesurfer] libtiff.so.3 instalaton error ?...

2009-07-27 Thread Dirk Dettmering
Hy, Pedro Paulo de Magalhães Oliveira Junior wrote: > I think if he forgot the root password there's no way to do this > For sure is it possible. He only has to regain root access if the superuser password has been lost in space! > 2009/7/24 Gonzalo Rojas Costa mailto:groj...@puc.cl>> > B

Re: [Freesurfer] Overlay surface onto EPI

2009-07-27 Thread Douglas N Greve
These things are devilish to figure out, but I think I would try this instead: srf_epiVox = inv(vox2ras_epi)*bbregMat*srfVert doug Praneeth Namburi wrote: > > Hello Dr. Greve, > I used the bbregister tool to register a BOLD EPI volume to the > surface with the --init-fsl option. The result loo

Re: [Freesurfer] rerun auto-recon on error output

2009-07-27 Thread Nick Schmansky
'bugr' is the command to type to gather most of the info we need to debug a problem. the 'recon-all.log' file is the biggest help. if you want to just try rerunning, then try: recon-all -s -make all Nick On Mon, 2009-07-27 at 04:12 +0200, Michael Scheel wrote: > Hi freesurfer-experts, > >

Re: [Freesurfer] Overlay surface onto EPI

2009-07-27 Thread Don Hagler
I worked this out recently, and it is a bit complicated. Attached is a matlab function that can convert a register.dat file into a proper ras2ras transformation matrix that can be used in matlab. Be sure to read the help (you need to provide the "optional" input for correct results). If M is

[Freesurfer] FW: loading label in tksurfer

2009-07-27 Thread Sharmili 57
Hi ! I've edited a label in tkmedit and now I want to open it with tksurfer, but I get the following error message. Could anyone help me? Best Sharmili Neuigkeiten in Deinem Netzwerk? Findest Du hier! _ http://redirect

Re: [Freesurfer] FW: loading label in tksurfer

2009-07-27 Thread Krish Subramaniam
Hi Sharmili Can you copy and paste the text which tksurfer shows when you try to open the label? You have attached an image and it doesn't seem to show the entire text. Krish On Jul 27, 2009, at 6:54 PM, Sharmili 57 wrote: > <20090727