Bruce Fischl wrote:
> Hi Judit,
>
> all the edits will be kept, so that shouldn't be a problem. It's hard
> to diagnose the wm segmentation without looking at a volume, but if
> they are really hyperintense you may need to manually fill them in in
> the wm.mgz. As for mri_cc, you should use aseg
Hello,freesurfer experts
I test freesurfer on my computer and run"recon-all -s bert -autorecon1" and
"recon-all -s bert -autorecon3" successfully, but run "recon-all -s bert
-autorecon2",there were some errors,as follows:
.
> > #
> > #...@# Cor
Hi Freesurfer experts,
I asked this question previously, but I found it problematic when displayed
in your mailist. I'm sorry that the question still not solved and I feel
sorry to trouble you again.
In your sphere registration in freesurfer, the procedure is like: creating
the template.tif by m
Hi Judit,
there is a white matter parcellation that is run by default called
wmparc.mgz. Anything else is future work. The pial surface misplacement
is usually a result of the white matter being wrong, but the intervention
depends on the problem, so we'd need to see the example. As for the
edit
Hi Jidan,
the atlas only exists in spherical coords. To represent a folded surface we
either (1) map to an individual subject, or (2) use a volume transform such
as tal and the vertex correspondence from the sphere.reg to find the
average coordinate of a vertex. This is how we build the fsaver
Dear All,
In addition to eTIV based on Tailarach transform matrix (see Buckner et al.
paper), is there other estimated total intracranial volume method, for example,
using the BET2 (brain extraction tool)?
Thank you in advance,
Flavio
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Fre
