[Freesurfer] mris_divide_parcellation output problem solved

2009-01-17 Thread Jürgen Hänggi
Dear FS experts My former problem is solved. When loading the produced annot with the GUI, the formerly reported problem disappear. Regards Juergen -- Juergen Haenggi Ph.D. (Dr. des.) Division Neuropsychology Institute of Psychology Univer

[Freesurfer] Mris_divide_parcellation II

2009-01-17 Thread Jürgen Hänggi
Dear FS experts Sorry, me again. If I divide the parcellations into areas of 100 mm2 only the most posterior part of the parcellations will be divided. Only with a threshold of about 500 mm2, the whole hemisphere's parcellations will be divided. Are there not enough labels resp. colors available?

Re: [Freesurfer] mris_divide_parcellation

2009-01-17 Thread Bruce Fischl
Hi Jürgen, the cmdline you gave will only divide units bigger than 100 mm^2. Is that what you want? cheers, Bruce On Sat, 17 Jan 2009, Jürgen Hänggi wrote: Daer FS experts When using the command: mris_divide_parcellation Ego_Mean3_FineParc rh aparc.annot 100 rh_annot_100 Only some poster

Re: [Freesurfer] Mris_divide_parcellation II

2009-01-17 Thread Bruce Fischl
Hi Jürgen, it will pick a random (unique) color for each new parcellation unit. cheers, Bruce On Sat, 17 Jan 2009, Jürgen Hänggi wrote: Dear FS experts Sorry, me again. If I divide the parcellations into areas of 100 mm2 only the most posterior part of the parcellations will be divided. On