[Freesurfer] AW: Freesurfer Digest, Vol 53, Issue 23

2008-07-24 Thread Steinmann, Iris
Hi, I load Version 4.0,5, and it works! Thanks!!! Yet, I just have another question now: Is it possible to conduct a conjunction analysis like implemented in SPM5? If not, is it valid to simply take the p-maps in the surface space and compute the pooled dependent p-values according

[Freesurfer] Compute individual statistics (selxavg3)

2008-07-24 Thread Balaji Goparaju
Hi Doug and all, There is another problem when i try the individual statistics, I use the command selxavg3-sess -analysis LD-analysis -s LD-functional and i am getting an error: ERROR: cannot find volume matching /Users/balajigoparaju/Desktop/subjectdata/LD-functional/bold/006/mcextreg ERROR:

Re: [Freesurfer] Version 4.0.4

2008-07-24 Thread Nick Schmansky
Tricia, Yes, this one is 32bit: freesurfer-Linux-centos4-stable-pub-v4.0.5-full.tar.gz from this page: https://surfer.nmr.mgh.harvard.edu/fswiki/Download Nick On Tue, 2008-07-22 at 14:59 -0700, Tricia Merkley wrote: > We ran several subjects using version 4.0.4 and now need to reinstall > fre

Re: [Freesurfer] Version 4.0.4

2008-07-24 Thread Tricia Merkley
Thanks Nick. Just to clarify, would it be alright to mix versions 4.0.4 and 4.0.5, since we already ran several subjects using 4.0.4?  Is 4.0.5 just a new feature release for post-processing, or were any changes made to the processing pipeline? Thanks, Tricia --- On Thu, 7/24/08, Nick Schmansk

Re: [Freesurfer] Version 4.0.4

2008-07-24 Thread Nick Schmansky
Tricia, Yes, you can mix v4.0.4 and v4.0.5. In general, we recommend always using the same version, but in this case, only features were added to v4.0.5. The thing to do is consult this page: https://surfer.nmr.mgh.harvard.edu/fswiki/ReleaseNotes and look at what has changed between versions t