Hi,
I downloaded the freesurfer-Linux-rh9-stable-pub-v4.0.3-full, and I followed
the instructions on your website (
http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Linux-platform-release-full.README.txt
):
1) extract to /usr/pubsw/packages/
2) place the license file in the resulting /usr/pubs
p.s. are the 001.mgz and 002.mgz dark? The orig.mgz? Sometimes nu_correct
can create very dark images, and there are some switches you can loo
through to correct them. Alternatively if it is the 001.mgz, mri_convert
has a scale option you can use.
cheers,
Bruce
On Fri, 25 Apr 2008, Jerry Yeo
You have to install XGL lib.
Which distro do you have?
2008/4/27 Lars M. Rimol <[EMAIL PROTECTED]>:
> Hi,
> I downloaded the freesurfer-Linux-rh9-stable-pub-v4.0.3-full, and I followed
> the instructions on your website
> (http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Linux-platform-relea
Dear Bruce et al.,
I noticed a while back that there was a thread on local distortions
(too much stretching + curlicues) popping up after mris_sphere; we've
seen similar things, and thus far haven't been able to fix them by
tweaking options. Is there any update on this?
More generally, ar
Hi Fred,
Do you mean the ?h.sphere or the ?h.sphere.reg? We actully found in a
couple of recent papers that optimal Brodmann area alignment is obtained
when the morph is much less flexible than our typical one. The most recent
dev version of mris_register uses the default parameters -dist 5 -p
Hi Bruce
sorry, meant sphere.reg. Shall try increasing some rigidity. And
should have occurred to me to look at aparc.annot.
Thanks for the early Sunday morning reply (!),
cheers,
Fred
On 27 Apr 2008, at 16:22, Bruce Fischl wrote:
Hi Fred,
Do you mean the ?h.sphere or the ?h.sphere.reg?
Lars, or you should try the centos4 distribution. the rh9 distribution
is really for older linux installations, and we should probably not
offer it anymore because of the confusion it creates.
Nick
On Sun, 2008-04-27 at 10:54 -0300, Pedro Paulo de Magalhães Oliveira
Junior wrote:
> You have to i
