Hi Bruce,
On Friday 22 February 2008 16:36:34 Bruce Fischl wrote:
> Hi Thomas,
>
> the aseg includes hypointensities, but there's only so much you can do
> with only a T1-weighted image. We do have some beta versions that use a
Could i possibly have the betas for testing?
Thanks,
Martin
___
What caption are you refering to?
Graham
At 3/4/2008 07:44 AM, you wrote:
>Hello,
>
>Is there a way to adjust the caption (at least turn it on and off) in a
>tcl script. I couldn't find any information on the wiki.
>
>Cheers,
>Dan
>
>
>--
>
>
>___
>Fr
Hello,
I have the same error (mri_watershed Error: GLOBAL region of the brain empty
!) as described Micheal Harms' mail (below) which left I guessed as
unanswered. Any help would be appreciated.
Thanks,
Ozlem OZMEN-OKUR
Bogazici Univ. Biomedical Engineering
Istanbul-TURKEY
[Freesurfer] autoreco
what caption do you mean?
On Tue, 4 Mar 2008, Daniel Wakeman wrote:
Hello,
Is there a way to adjust the caption (at least turn it on and off) in a
tcl script. I couldn't find any information on the wiki.
Cheers,
Dan
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Freesurfer mailing list
F
Hi Ozlem,
if it's the talairach_with_skull.lta as described previously. I have a fix
for it that will be in the upcoming stable. In the interim you could try
running watershed without the talaiarch_with_skull.lta
cheers,
Bruce
Hello,
I have the same error (mri_watershed Error: GLOBAL regi
Hello-
Is there anywhere to download the 40 subjects used to create the Desikan
atlas? If so, do these datasets contain all the transform/FreeSurfer files
from start to finish?
Thanks,
Joel
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htt
Hi,
Sorry, As in View>>Caption. In the menu bar.
Thanks
Dan
> What caption are you refering to?
>
> Graham
>
> At 3/4/2008 07:44 AM, you wrote:
>>Hello,
>>
>>Is there a way to adjust the caption (at least turn it on and off) in a
>>tcl script. I couldn't find any information on the wiki.
>>
>>C
Hi Dan,
I'm not sure this feature is supported. What did you want to do with it?
Bruce
On
Tue, 4 Mar 2008, Daniel Wakeman wrote:
Hi,
Sorry, As in View>>Caption. In the menu bar.
Thanks
Dan
What caption are you refering to?
Graham
At 3/4/2008 07:44 AM, you wrote:
Hello,
Is there a way
It would be a handy way of titling figures.
Dan
> Hi Dan,
>
> I'm not sure this feature is supported. What did you want to do with it?
>
> Bruce
> On
> Tue, 4 Mar 2008, Daniel Wakeman wrote:
>
>> Hi,
>>
>> Sorry, As in View>>Caption. In the menu bar.
>>
>> Thanks
>> Dan
>>> What caption are you
Hmmm, well since the menus are implemented in tksurfer.tcl, it might be
possible to add some tcl to that file (actually it already has code to
daisy-chain to user-provided extra code on startup), to implement some means to
control caption on/off by a later script.
Not known by me: how the norma
you can give tksurfer a -title option when you start it up, but that
might not help you.
Daniel Wakeman wrote:
It would be a handy way of titling figures.
Dan
Hi Dan,
I'm not sure this feature is supported. What did you want to do with it?
Bruce
On
Tue, 4 Mar 2008, Daniel Wakeman wro
Is that the command line you used? I don't think there is an -autorecon
option.
doug
Teddy Youn wrote:
Hi again,
I had a quick question about generating wmparc.stats. I have tried to run recon3 with the -wmparc flag and have encountered an error where ?h.smoothwm is not being read even thou
Hi Dan,
I managed to track this down and fix it. Note that the cursor will move a
bit to the center of the voxel with that tal coord, but not much. The fix
will be in the next stable release (soon), or you can get a dev version
from Nick.
cheers,
Bruce
On Mon, 3 Mar 2008, Dan Dillon wrote:
Thanks Bruce!
DD
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Bruce Fischl
Sent: Tuesday, March 04, 2008 10:54 AM
To: Dan Dillon
Cc: 'Freesurfer Mailing List'
Subject: Re: [Freesurfer] Odd tkmedit behavior
Hi Dan,
I managed to track this down and fix
Hello,
I am trying to use Xiao Han's ThicknessRepeatability methods for a
longitudinal study. I have successfully completed step one, which is rigid
registration of the pre and post scans, but I am having problems with step
2. This step uses the mris_thickness_diff function to compute the thick
Hi Scott,
I wouldn't think this would happen much unless your registration was
pretty far off. I can fix the bug in our code that causes this to happen,
but your results still won't be reasonable if they aren't well-aligned.
cheers,
Bruce
On Tue, 4 Mar 2008, Scott Beeman wrote:
Hello,
I a
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