Dear Freesurfers,
There seems to be two ways for functional/structural registration.
One is spmregister-sess, and the other is autoreg-sess.
What are the differences between these two scripts?
Which one do you prefer to use and why?
Thanks!
Tren
___
Fr
There are actually three ways! The 3rd is fslregister-sess. I prefer
spmregister-sess or fslregister-sess. These compute a registration
directly between the functional and the brain.mgz anatomical.
autoreg-sess performs a multi-step registration. First it looks for a
same-session anatomical whi
Hi Tren,
I've been using spmregister-sess. As you note autoreg-sess and
spmregister-sess compute the same matrix but in different ways.
autoreg-sess works in two stages. First, it aligns the same-session
anatomical to the FreeSurfer anatomical. Next, it computes the
registration from the functio
.Bold { font-weight: bold; }
.Title { font-weight: bold; font-size: 18px; color: #cc3300; }
.Code { border: #8b4513 1px solid; padding-right: 5px; padding-left: 5px;color:
#66; font-family: 'Courier New' , Monospace;background-color: #ff9933; }
How are you?When I run recon-all -s subjid -all
Folks:
I'm trying to get a complete picture of what's entailed in creating our own
atlas, including our own average reference sphere, so if there's a doc on
this specific subject I'd love to see it.
Absent that, below are questions to fill in some gaps:
1. Normal spherical reg: mris_registe
Folks:
We notice that when we try editing labels in tksurfer (eg: draw an outline,
fill with new label value), this results in tksurfer's control panel
showing two labels everywhere (even where we didn't edit), with the second
one saying "1 additional label" (or something like that... don't ha
Hi Thomas, hi FS users
Here are the data from my MacPro QuadCore (Mac OS X 10.4)
CPU-MODEL: 2 x Intel(R) Xeon(R)
CPU-FREQ: 2.66GHz
RAM: 7GB
HD-type: SATA (Serial ATA)
Chip-Set: NVIDIA GeForce 7300 GT
FREESURFER-VERSION TIME:
freesurfer-Darwin-tiger-i686-stable-pub-v4.0.1-full.dmg
Processing
