Hi Don,
these matrices are all very tricky. Try looking at:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/fscoordinates.ppt
I don't the the lta is documented in there explicitly, but it has the
same interpretation as the MNI xfm.
doug
Don Hagler wrote:
Hi Bruce,
I thoug
Hi Cate,
what was the volume to autorecon1? Does it display properly in tkmedit?
Bruce
On
Fri, 15 Jun 2007, Catherine Hartley wrote:
Hi,
I just ran autorecon1 on a batch of data and when I view the brainmask in
tkmedit, selecting the coronal orientation actually displays the sagittal
oriena
are the mri/orig/XXX.mgz files ok? What about the mri/rawavg.mgz?
Catherine Hartley wrote:
Hi,
I just ran autorecon1 on a batch of data and when I view the brainmask in
tkmedit, selecting the coronal orientation actually displays the sagittal
orienation and vice versa (horizontal is fine). Al
Hello,
On Freesurfer 3.0.4, I used 'mri_annotation2label' to derive a set of
labels from the Desikan atlas annotation file (lh.aparc.annot).
If I then run mris_anatomical_stats using the label files,
e.g.,
mris_anatomical_stat -l lh.bankssts.label $subj lh
the resulting statistics that are out
Hi,
The two mri/orig/xxx.mgz files load in tkmedit with the orientations
correctly assigned.
When I load rawavg.mgz, I get the following message (which seems relevant),
and then it loads with the coronal and sagittal orientations swapped.
% [catherine:phelpslab/Cate/extinction] cate% tkmedit AS0
Hi, I was wondering if there was any way with mri_glmfit to override the
limit of 500 subjects. I'm only barely above, but wanted to avoid
arbitrarily excluding people if it's practical. Thanks,
-Aaron-
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Hi Aaron,
I don't think that there is a limit. What makes you think so? Or did I
say so at one points?
doug
On Fri, 15 Jun 2007, Goldman, Aaron (NIH/NIMH) [C] wrote:
Hi, I was wondering if there was any way with mri_glmfit to override the
limit of 500 subjects. I'm only barely above, but wa
