Thank you,it is working now. However, I have anorientation problem with
automatic registration results. This problem has been mentioned before but i
could not find any reply. I think this is something related following lines
where I found it in the reg- feat2anat log file.
Regards
Uzay
Hi,
Is there a way to get probabilistic labels for ?h.sphere.reg? If I
understand it right, mris_ca_label oand mris_divide_parcellation only
return the MAP solution of the probabilistic labels.
Thanks,
Wanmei
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Hi Wanmei,
do you want the full posterior density?
Bruce
On Fri, 18 May 2007, Wanmei Ou wrote:
Hi,
Is there a way to get probabilistic labels for ?h.sphere.reg? If I
understand it right, mris_ca_label oand mris_divide_parcellation only
return the MAP solution of the probabilistic labels.
In response to the questions, I do see the segmentation properly in
colors (as a translucent color overlay on the anatomical), and I am sure
I am using the Edit Segmentation tool.
Clicking and dragging with the tool does change the segmentation volume,
it just does not change it to the "Sgmtn
Hi Annie,
The aparc+aseg has the aseg subcortical labels in the wm regions, and has
the parcellation labels along the cortex. This is overlaid on volumes in
tkmedit. A description and a snapshot is shown at the bottom of this
page:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Output
Hi Jared,
How are you selecting the segmentation that you wish to be changing it to?
Have you opened the Segmentation Bruch Info dialog window and selected
from the list in there?
jenni
On Fri, 18 May 2007, Jared Conley wrote:
In response to the questions, I do see the segmentation properly
Jenni Pacheco wrote:
Hi Jared,
How are you selecting the segmentation that you wish to be changing it
to? Have you opened the Segmentation Bruch Info dialog window and
selected from the list in there?
jenni
On Fri, 18 May 2007, Jared Conley wrote:
In response to the questions, I do see the
When you are editing the segmentation, are you using the middle button to
change the label?
jenni
On Fri, 18 May 2007, Jared Conley wrote:
Jenni Pacheco wrote:
Hi Jared,
How are you selecting the segmentation that you wish to be changing it to?
Have you opened the Segmentation Bruch Info d
Jenni Pacheco wrote:
When you are editing the segmentation, are you using the middle button
to change the label?
jenni
On Fri, 18 May 2007, Jared Conley wrote:
Jenni Pacheco wrote:
Hi Jared,
How are you selecting the segmentation that you wish to be changing
it to? Have you opened the Seg
I would like to use mri_binarize but don't seem to have it (running stable
3.0.3). Where can I get it?
Dan Dillon, Ph.D.
Post-doctoral Fellow
Affective Neuroscience Lab
Dept. of Psychology, Harvard University
Phone: (617) 496-5222
E-mail: [EMAIL PROTECTED]
_
It's a MAC thing. With a standard three-button mouse it's the middle
button that adds the label. If you use a MAC mouse or other non 3-button
mouse there are other keystrokes which you may have to do in order to have
the middle button option.
sorry,
Jenni
On Fri, 18 May 2007, Jared Conley w
Dan,
You can get a copy here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/dev/
Nick
On Fri, 2007-05-18 at 13:46 -0400, Dan Dillon wrote:
> I would like to use mri_binarize but don’t seem to have it (running
> stable 3.0.3). Where can I get it?
>
>
>
> Dan Dillon, Ph.D.
>
What do you mean there was an orientation problem? If you use analyze
files, then it relies on the FSL reg to std space being correct. Is it?
uzay emir wrote:
Thank you,it is working now. However, I have anorientation problem
with automatic registration results. This problem has been mentioned
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