Hi,
is this "mri_convert" compiled for red hat 9 (mandrake),
or are there just some libraries missing, for we get the following:
error while loading shared libraries: libvnl_algo.so: cannot open shared
object file: No such file or directory
Sorry about the hassle,
-Aapo
On Wed, 13 Sep 2006
Hi,
I have been running group analysis of thickness, with no problems.
However, when trying to run a group analysis of curv.pial the mri_glmfit
crashes. I'm basically using the same group descriptor file, contrast
matrix, and command line as for thickness, but keep getting the error
message
Juergen,
I think the centos4 freesurfer distribution should work for on rhel.
Also be sure to check if you have an x86_64 system, as we have 32bit
(centos4) and 64bit (centos4_x86_64) distributions.
Nick
> Dear FreeSurfer user
>
> which FreeSurfer version I have to use when running OS
> Red Hat
Hi Per,
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
when reporting a bug or problem.
thanks
doug
Per Alm wrote:
Hi,
I have been running group analysis of thickness, with no problems.
However, when trying to run a group analy
Title: Message
Hi, I think this is
one for Doug,
Thomas Witzel told
me it is possible to resample the volume activation data
from
spm2 onto the
cortical surface generated with freesurfer. Is their a blurb around that details
the process
or could you give me
some instructions.
thanks
Aapo,
That version of mri_convert was built from our internal development
environment, which uses the VTK Numerics Library. I've posted the
binaries for that library for redhat 9 here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks
The file is called vnl-libso-rh9.tar.gz.
Copy
Try this Greg:
1. Convert the brain.mgz volume to analyze:
mri_convert $SUBJECTS_DIR/subjectname/mri/brain.mgz brain.img
2. Align brain.img with your functional data in spm (eg, func.img)
3. Create your spm statistical output (eg, t.img)
4. Create the registration file:
tkregister2 -
