[Freesurfer] cannot configure overlay in tksurfer

2006-01-23 Thread Eric Feczko
Hi all, I'm trying to overlay some cortical thickness correlation maps onto a freesurfer surface, and when I select configure->overlay from the toolbar, an error message pops up stating: bad window path name ".wwConfigOverlayDisplayDlog.fwFlags.cbwReverse" bad window path name ".wwConfigOve

Re: [Freesurfer] FS-FAST registration across sessions

2006-01-23 Thread Doug Greve
You can try putting all the runs into a single bold directory. The motion correction will (do it's best to) align them. doug Jane Aspell wrote: Hi My question was asked last year by Tommi Raij (see email pasted below) but I couldn't find a reply to it in the archives. I am analysing

[Freesurfer] notes on Jan 2006 release

2006-01-23 Thread Sasha Wolosin
Dear all, In the notes on the Jan 2006 release it was mentioned that the subcortical atlas is built from the Siemens scans, and thus might not be reliable for GE scans. How might this subcortical atlas handle data aqcuired on a Philips scanner? thanks, Sasha Disclaimer: The materials in th

Re: [Freesurfer] notes on Jan 2006 release

2006-01-23 Thread Bruce Fischl
Hi Sasha, in the newest version of the aseg we've made a lot of progress on this front, and labeling across different platforms is pretty much comparable to labeling on the same platform. cheers, Bruce On Mon, 23 Jan 2006, Sasha Wolosin wrote: Dear all, In the notes on the Jan 2006 rel

Re: [Freesurfer] notes on Jan 2006 release

2006-01-23 Thread Sasha Wolosin
Can the aseg from the current dev release (Oct 3rd, 2005) be used to get subcortical measurements from data acquired on Philips scanner? Or is the new aseg only available in the upcoming release? Thanks, Sasha >>> Bruce Fischl <[EMAIL PROTECTED]> 1/23/2006 2:42 pm >>> Hi Sasha, in the newest ve

Re: [Freesurfer] notes on Jan 2006 release

2006-01-23 Thread Bruce Fischl
it can be, but the new one will be more accurate On Mon, 23 Jan 2006, Sasha Wolosin wrote: Can the aseg from the current dev release (Oct 3rd, 2005) be used to get subcortical measurements from data acquired on Philips scanner? Or is the new aseg only available in the upcoming release? Thank

FW: [Freesurfer] overlay thickness maps

2006-01-23 Thread Kirk, Gregory
-Original Message- From: Kirk, Gregory Sent: Monday, January 23, 2006 4:25 PM To: 'Kevin Teich' Subject: RE: [Freesurfer] overlay thickness maps Yes Kevin, im still a dum dum sometimes, as your comment I Looked it in shell window, and saw all was not well. In response to Load-Overla