[Freesurfer] CMA parcellation

2005-12-27 Thread Sasha Wolosin
Dear all, I am interested in using the CMA parcellation to create ROI's. Is it possible to create ?h.aparc.annot files using the CMA parcellation scheme instead of the surface-based parcellation scheme? Thanks, Sasha Disclaimer: The materials in this e-mail are private and may contain Pro

[Freesurfer] threshold

2005-12-27 Thread Sasha Wolosin
Dear all, In group analysis, how are the various thresholds (min, mid, max) related to p-values? Thanks, Sasha Disclaimer: The materials in this e-mail are private and may contain Protected Health Information. Please note that e-mail is not necessarily confidential or secure. Your use of e

Re: [Freesurfer] threshold

2005-12-27 Thread Bruce Fischl
Hi Sasha, they are -log10(p), with a sign added to show the direction of the effect. e.g. 1e-4 shows up as 4 (or -4) cheers, Bruce On Tue, 27 Dec 2005, Sasha Wolosin wrote: Dear all, In group analysis, how are the various thresholds (min, mid, max) related to p-values? Thanks, Sasha

[Freesurfer] tksurfer script

2005-12-27 Thread Fornito, Alexander
Hi, Is there any way to load a colour look-up table through tksurfer scripting? I can't seem to see any options in the usage. Thanks, Alex Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne [EMAIL PROTECTED]