RE: [Freesurfer] mri_vol2surf

Success!! (I think) I converted the binary mask to a greyscale image, and it seems like custom fill is able to detect the appropriate boundaries. I created a label from this and was able to generate anatomical stats for the ROI (hooray!). 2 more questions: 1 - when I go back into to tkmedit and l

RE: [Freesurfer] mri_vol2surf

you need to click up to statistical threshold On Wed, 6 Jul 2005, Fornito, Alexander wrote: Hi Bruce, I tried to do this this, but custom fill doesn't seem to find the boundaries of the ROI, so it ends up filling everything. I've tried playing with some of the options but it doesn't chang

[Freesurfer] General Question

Hello all, I just had a general question about freesurfer. Does freesurfer use Boundary element model for realistic human head (not sphere etc) ? Thanks, Arvind Gururajan ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.m

[Freesurfer] Original surface and sphere correspondence

Hi, After mapping the brain surface onto a sphere, we have the surface files. Is there anyway that we can know the correspondence (or the transformation) between the points on the original surface and those on the sphere? Thanks a lot. Best, ntt _

Re: [Freesurfer] General Question

yes. Matti can give you details if you're interested. On Wed, 6 Jul 2005, Arvind Gururajan wrote: Hello all, I just had a general question about freesurfer. Does freesurfer use Boundary element model for realistic human head (not sphere etc) ? Thanks, Arvind Gururajan _

Re: [Freesurfer] Original surface and sphere correspondence

sure, the vertex indices are invariant, so you just lookup the vertex position on each surface On Wed, 6 Jul 2005, Ngo Trung Thanh wrote: Hi, After mapping the brain surface onto a sphere, we have the surface files. Is there anyway that we can know the correspondence (or the transformation) b