Re: [Freesurfer] voxel values in destrieux file

2016-08-23 Thread pierre deman
ok thanks a lot ! do you know when it will be fixed in the recon-all as well ? Cheers, Pierre On Fri, Aug 19, 2016 at 7:45 PM, Douglas Greve wrote: > The error is in recon-all. If you want to fix this one outside of recon-all > you can run > cd $SUBJECTS_DIR/subject/mri > mri_aparc2aseg --s

Re: [Freesurfer] voxel values in destrieux file

2016-08-19 Thread Douglas Greve
The error is in recon-all. If you want to fix this one outside of recon-all you can run cd $SUBJECTS_DIR/subject/mri mri_aparc2aseg --s subject --volmask --aseg aseg.presurf.hypos --a2009s On 8/19/16 11:08 AM, pierre deman wrote: Hello, I am looking at the destrieux atlas generated by recon-a

Re: [Freesurfer] voxel values in destrieux file

2016-08-19 Thread Douglas Greve
Sorry, that is a bug. I introduced it in a change a few months ago. I'll fix it. Thanks! On 8/19/16 11:08 AM, pierre deman wrote: Hello, I am looking at the destrieux atlas generated by recon-all (I use the freesurfer dev version), the file aparc.a2009+aseg.mgz), and sometimes the value of