Fantastic!!
It is worked. Thank you very much for the great help!
Sent: Thursday, June 15, 2017 at 1:51 PM
From: "Bruce Fischl"
To: "Freesurfer support list"
Subject: Re: [Freesurfer] substract images
try:
mri_binarize mask.nii --min 0 --max .1 --o mask.rev.nii --binv
. My
appologies for asking to many times.
Sent: Thursday, June 15, 2017 at 1:32 PM
From: "Bruce Fischl"
To: "Freesurfer support list"
Subject: Re: [Freesurfer] substract images
Hi Jon
use mri_binarize on your initial mask to create a new one for mri_mask (use
--min and
s the
> opposite, the skull without the brain. I highly aprreciate any suggestion.
> Sent: Thursday, June 15, 2017 at 1:19 PM
> From: "Bruce Fischl"
> To: "Freesurfer support list"
> Subject: Re: [Freesurfer] substract images
> Hi Jon
>
> mri_mask s
eciate any suggestion.
Sent: Thursday, June 15, 2017 at 1:19 PM
From: "Bruce Fischl"
To: "Freesurfer support list"
Subject: Re: [Freesurfer] substract images
Hi Jon
mri_mask should do the trick
cheers
Bruce
On Thu, 15 Jun 2017, John Anderson wrote:
> Dear experts,
> I have i
the brain. I highly aprreciate any suggestion.
Sent: Thursday, June 15, 2017 at 1:19 PM
From: "Bruce Fischl"
To: "Freesurfer support list"
Subject: Re: [Freesurfer] substract images
Hi Jon
mri_mask should do the trick
cheers
Bruce
On Thu, 15 Jun 2017, John Anderson wr
Hi Jon
mri_mask should do the trick
cheers
Bruce
On Thu, 15 Jun 2017, John Anderson wrote:
Dear experts,
I have image and mask and I want to subtract the mask from the image.
Meaning I want to get image free of specific anatomical region. For example,
I have image T1.nii for the brain and mas
