Sincerely,
Yilei
*From:* Dong, Yilei
*Sent:* Tuesday, April 23, 2024 3:34 PM
*To:* freesurfer@nmr.mgh.harvard.edu
*Subject:* Re: [Freesurfer] recon-all process still not finishing
properly
Hi Freesurfer support,
I ha
it's more
of a cluster issue I have to talk with the staff that manage it?
Sincerely,
Yilei
From: Dong, Yilei
Sent: Tuesday, April 23, 2024 3:34 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] recon-all process still not finishing properl
behalf of Douglas N. Greve
Sent: Thursday, April 18, 2024 2:57 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] recon-all process still not finishing properly
not sure what is happening. You can run recon-all with -debug and capture the
output (both stdout and stderr) into a
not sure what is happening. You can run recon-all with -debug and
capture the output (both stdout and stderr) into a file. This will cause
it to print out huge amounts of text specifying what it is doing on each
line. You should also see if there is some stderr output that is not
being caught.
