Re: [Freesurfer] parallel processing of long-run fails

2023-11-08 Thread P Pieperhoff
External Email - Use Caution Thank you for your reply! Best regards, Peter On Wed, Nov 8, 2023 at 2:41 PM Huang, Yujing wrote: > Hi Peter, > > > > I would suggest not to use ‘-parallel’. It is handled by recon-all to run > multiple commands in parallel. It can run into collisi

Re: [Freesurfer] parallel processing of long-run fails

2023-11-08 Thread Huang, Yujing
Hi Peter, I would suggest not to use ‘-parallel’. It is handled by recon-all to run multiple commands in parallel. It can run into collisions if they are not synchronized. These recon-all options ‘-threads <>’, ‘-openmp <>’, ‘-nthreads <>’ tell individual program to split the tasks and run the