Re: [Freesurfer] orientation of the data

2010-05-03 Thread Bruce Fischl
what format is your input data in? On Mon, 3 May 2010, Ilana Hairston wrote: > I have also been getting error messages, after Talairach correction using > tkregister2 > > *...@# Talairach Failure Detection Mon May 3 09:57:40 EDT 2010 > /usr/local/freesurfer/subjects/FS060828cr/mri > > talairach_a

Re: [Freesurfer] orientation of the data

2010-05-03 Thread Ilana Hairston
I have also been getting error messages, after Talairach correction using tkregister2 *...@# Talairach Failure Detection Mon May 3 09:57:40 EDT 2010 /usr/local/freesurfer/subjects/FS060828cr/mri talairach_afd -T 0.005 -xfm transforms/talairach.xfm talairach_afd: Talairach Transform: transforms

Re: [Freesurfer] orientation of the data

2010-05-03 Thread Bruce Fischl
Hi Jan, what was your input data? Bruce On Mon, 3 May 2010, Janani Dhinakaran wrote: > Hello experts, > > I've been having some trouble with the talairach during recon. I followed > previous instructions and checked the rawavg image and found that it was in > wrongly oriented. > The sagittal pic