Sorry for the slow response (at OHBM). Yes, that sounds correct. If you pass it
a file, then all other options are ignored.
On 6/12/2019 7:12 AM, Joseph Dien wrote:
External Email - Use Caution
Okay, I looked through the source code itself and I think I worked it out.
preproc-sess call
External Email - Use Caution
Okay, I looked through the source code itself and I think I worked it out.
preproc-sess calls on stc-sess, passing it both the sdf and the ngroups flags.
stc-sess calls on stc.fsl, passing it both the sdf and the ngroups flags.
stc.fsl calls on sliceti
External Email - Use Caution
looking further into the archives, I see that the -sdf flag can be used. I’m
still uncertain about the -ngroups flag. I see at least a couple other users
have asked about this but I don’t see a response. In the present case, if
there are 60 slices
