Hi Ajay
.mgh file doesn't store the necessary topological informations
(neighbors, faces, and such) to store a surface. You can convert to gifti
and some other modeling formats (or ascii)
cheers
Bruce
On Wed, 6 Apr 2016, Ajay Kurani wrote:
Thanks for clarifying Bruce.
Just curious is the
Thanks for clarifying Bruce.
Just curious is there any freesurfer commands to convert this internal
surface file into a .mgh file for external use? For example mri_surf2vol
or mri_surf2label etc?
Thanks,
Ajay
On Wed, Apr 6, 2016 at 5:17 PM, Ajay Kurani
wrote:
> Hello Freesurfer Experts,
>
>
Hi Ajay
it's a surface file in our own (goofy) internal format. You can use
mris_info to dump the header, or read it into matlab if you like
cheers
Bruce
On Wed, 6 Apr 2016,
Ajay Kurani wrote:
Hello Freesurfer Experts,
I ran the following commands (from recon-all devtable) to create a
Hello Freesurfer Experts,
I ran the following commands (from recon-all devtable) to create a surface
model of the ROI's that I am interested in (they start off as a binary 1
mask):
1) mri_tesselate ../mri/lh.ROI.mgz 1 ../surf/lh.orig.nofix
2) mris_extract_main_component ../surf/lh.orig.nofix ../s
Hi Ajay
Florent Segonne developed some volumetric topology correction algorithms
as well as surface-based ones when he was here. Try
mri_topologycorrection and see how it works for you (although be warned
that we haven't tried it in ages)
cheers
Bruce
On Mon, 21 Mar 2016,
Ajay Kurani wrot
