That works!!!
Thank you,
Gabriel
> Date: Tue, 15 Mar 2011 14:34:00 -0400
> From: gr...@nmr.mgh.harvard.edu
> To: gabriel...@hotmail.com
> CC: fis...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu;
> ni...@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] mri_mas
om
> > CC: fis...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu;
> ni...@nmr.mgh.harvard.edu
> > Subject: Re: [Freesurfer] mri_mask problem
> >
> > Have you checked brainmask2raw.mgz? It looks like you've checked
> > brain2raw.mgz, but you're not using it for some reas
2.
Gabriel
> Date: Tue, 15 Mar 2011 13:30:40 -0400
> From: gr...@nmr.mgh.harvard.edu
> To: gabriel...@hotmail.com
> CC: fis...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu;
> ni...@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] mri_mask problem
>
> Have you checke
rt and mri_vol2vol, looks
> pretty similar, any ideas?
>
> Bests
> Gabriel
>
>
>
>
>
> > Date: Mon, 14 Mar 2011 08:57:16 -0400
> > From: fis...@nmr.mgh.harvard.edu
> > To: gabriel...@hotmail.com
> > CC: ni...@nmr.mgh.harvard.edu; freesurfer@n
ol2vol, looks pretty
similar, any ideas?
Bests
Gabriel
> Date: Mon, 14 Mar 2011 08:57:16 -0400
> From: fis...@nmr.mgh.harvard.edu
> To: gabriel...@hotmail.com
> CC: ni...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] mri_mask problem
>
similar, any ideas?
Bests
Gabriel
> Date: Mon, 14 Mar 2011 08:57:16 -0400
> From: fis...@nmr.mgh.harvard.edu
> To: gabriel...@hotmail.com
> CC: ni...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] mri_mask problem
>
> Hi Gabriel,
>
is something wrong on it,
> but I think is gonna be hard to send it to through the e-mail.
>
> Bests,
> Gabriel.
>
>
>
>> Subject: RE: [Freesurfer] mri_mask problem
>> From: ni...@nmr.mgh.harvard.edu
>> To: gabriel...@hotmail.com
>> Date: Thu, 10 Mar 2011
e e-mail.
Bests,
Gabriel.
> Subject: RE: [Freesurfer] mri_mask problem
> From: ni...@nmr.mgh.harvard.edu
> To: gabriel...@hotmail.com
> Date: Thu, 10 Mar 2011 21:38:50 -0500
>
> i'd have to try to replicate this myself, although it will have to wait
> till mond
hi, not sure what you are trying to do, as the commands below seem to do
what i expect them to do, which is to create a masked (skull-stripped)
version of rawavg.mgz. what do you mean by 'manual segmentation
changes'?, and what exactly is going wrong?
if you deleted voxels in brainmask.mgz, then
