Re: [Freesurfer] mri_label2volume issues

2010-09-17 Thread Michael Waskom
y do I use mri_binarize? Thanks, Prapti -Original Message- From: Douglas N Greve [mailto:gr...@nmr.mgh.harvard.edu] Sent: Friday, 17 September 2010 12:44 AM To: Prapti Gautam Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_label2volume issues Right, I see, mri_aparc2aseg is har

Re: [Freesurfer] mri_label2volume issues

2010-09-16 Thread Prapti Gautam
> > -Original Message- > From: Douglas N Greve [mailto:gr...@nmr.mgh.harvard.edu] > Sent: Thursday, 16 September 2010 1:34 AM > To: Prapti Gautam > Cc: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] mri_label2volume issues > > The problem is that mri_label2

Re: [Freesurfer] mri_label2volume issues

2010-09-16 Thread Douglas N Greve
t; -Original Message- > From: Douglas N Greve [mailto:gr...@nmr.mgh.harvard.edu] > Sent: Thursday, 16 September 2010 1:34 AM > To: Prapti Gautam > Cc: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] mri_label2volume issues > > The problem is that mri_label2volume just does

Re: [Freesurfer] mri_label2volume issues

2010-09-15 Thread Prapti Gautam
ubject: Re: [Freesurfer] mri_label2volume issues The problem is that mri_label2volume just does not work all that well on surface labels. Another way to do this is to create an annotation from the single label using mris_label2annot, then create a segmentation/mask volume using mri_aparc2a

Re: [Freesurfer] mri_label2volume issues

2010-09-15 Thread Douglas N Greve
The problem is that mri_label2volume just does not work all that well on surface labels. Another way to do this is to create an annotation from the single label using mris_label2annot, then create a segmentation/mask volume using mri_aparc2aseg. doug Prapti Gautam wrote: > > Dear freesurfers,