should be something like
mri_label2label --srclabel input.label --trglabel ouput.label --outmask
label.mask.nii.gz --regmethod surface --hemi lh --srcsubject subject
--trgsubject subject
On 1/30/2020 10:07 PM, Alexopoulos, Dimitrios wrote:
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Having diffic
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Having difficulty with how to use label2label for this purpose. Just need a
binary mask of medial wall (vertex number and 0 or 1s) on native surface.
What's would this command be?
On Jan 28, 2020 5:42 PM, "Greve, Douglas N.,Ph.D."
wrote:
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Yes, a label or roi metric file of 0 and 1s (preferably 0s for the medial wall
vertices) for that can be converted to workbench format.
Jim
On Jan 28, 2020 5:42 PM, "Greve, Douglas N.,Ph.D."
wrote:
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Do you mean you want a binary mask of the medial wall?
You can create a mask of the cortical label (?h.cortex.label) with
mri_label2label
You can then invert that with something like
fscalc lh.cortex.mask.mgz not -o lh.medialwall.mask.mgz
On 1/28/2020 6:31 PM, Alexopoulos, Dimitrios wrote:
