Re: [Freesurfer] matlab runtime error

2021-09-02 Thread Corinna Bauer
External Email - Use Caution Hi Andrew, I commented out the LD_LIBRARY_PATH from my .bashrc and that worked. Thanks! Corinna On Wed, Sep 1, 2021 at 10:53 PM Hoopes, Andrew wrote: > Hi Corinna, > > Do you happen to have the LD_LIBRARY_PATH environment variable set in your > she

Re: [Freesurfer] matlab runtime error

2021-09-01 Thread Hoopes, Andrew
Hi Corinna, Do you happen to have the LD_LIBRARY_PATH environment variable set in your shell? If so, I would unset it. LD_LIBRARY_PATH tends to mess with any programs linked to dynamic libraries. In this case, it’s forcing freeview to load the wrong matlab Qt libraries. Andrew From: freesurfer-

Re: [Freesurfer] Matlab Runtime error line 334

2021-03-23 Thread Cleary, Matthew
External Email - Use Caution Hi Andrew, Thank you for your reply, I really appreciate it. Sudo would not allow, so instead I downloaded MATLAB separately and attempted to follow that protocol. I managed to get quite far into the SegmentThalamicNuclei.sh process, but have reache

Re: [Freesurfer] Matlab Runtime error line 334

2021-03-16 Thread Hoopes, Andrew
Hi Matt, Hopefully this isn’t specific to M1, but I’m not sure it would be in this case. Maybe try running fs_install_mcr with sudo in front? Some users are suggesting it here: https://www.mathworks.com/matlabcentral/answers/176228-error-message-install_unix-not-found best Andrew From: freesur

Re: [Freesurfer] matlab runtime error - Hippocampal subfield segmentation

2020-04-24 Thread Hoopes, Andrew
Hi Alex, It looks like the curl completed successfully. It’s just a text file so it only takes a few seconds to download. best Andrew From: on behalf of "Lab of Autism and Developmental Neuroscience, Lab of Autism and Developmental Neuroscience" Reply-To: FS Help Date: Friday, April 24, 20