The difference is probably due to the partial volume correction, which
will be different with different segmentations
On 11/06/2017 03:06 PM, Ehsan Tadayon wrote:
> Thanks Bruce
> Thanks Doug
>
> that was a great help. I was able to run it as you mentioned. I also
> tried to see if I can get th
Thanks Bruce
Thanks Doug
that was a great help. I was able to run it as you mentioned. I also tried
to see if I can get the same values as aseg.stats file that you mentioned.
I created a binarized mask from aseg.mgz for a structure and ran the same
command. However, the values that I get are a lit
Look in the recon-all.log file for the command that generates the
aseg.stats file. Use that command but change aseg.mgz to whatever your
mask is (and change the output). Don't include the LUT on the command line.
On 11/1/17 10:24 PM, Ehsan Tadayon wrote:
Hello FS experts,
I'm trying to get t
Hi Ehsan
we do partial volume estimation for all border voxels in a label (like
your mask). Look at the help in mri_segstats and you should be able to sort
it out
cheers
Bruce
On Wed, 1 Nov 2017, Ehsan Tadayon wrote:
[490353fad4dbc1e2d4df113f9e07e0fb7d507be0.png?u=375924] Hello FS experts
