..@nmr.mgh.harvard.edu
>> To: gro...@computer.org
>> CC: freesurfer@nmr.mgh.harvard.edu; gr...@nmr.mgh.harvard.edu
>> Subject: Re: [Freesurfer] how to extract segmented hippocampus
>>
>> you can use mri_tessellate to create a mesh, then tksurfer will visualize
>>
m: fis...@nmr.mgh.harvard.edu
> To: gro...@computer.org
> CC: freesurfer@nmr.mgh.harvard.edu; gr...@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] how to extract segmented hippocampus
>
> you can use mri_tessellate to create a mesh, then tksurfer will visualize
> it
> On Thu, 17 Sep 2009
You can just use tksurfer, something like
tksurfer subject lh hippocampus
assuming you called it lh.hippocampus
There will be a lot of warnings/errors printed to the terminal. These
just have to do with the fact that the number of vertices will be
different than the cortical surfaces.
You can
you can use mri_tessellate to create a mesh, then tksurfer will visualize
it
On Thu, 17 Sep 2009, Gonzalo Rojas Costa wrote:
> Dear Douglas:
>
> And how can I view (render) in 3D the hippocampus that I got frok aseg.mgz
> with the mri_binarize command ?...
>
> Sincerely,
>
>
> Gonzalo Rojas Cos
Dear Douglas:
And how can I view (render) in 3D the hippocampus that I got frok aseg.mgz
with the mri_binarize command ?...
Sincerely,
Gonzalo Rojas Costa
> mri_binarize with --match 17 or --match 53 will do it
>
> doug
>
> Guang Zeng wrote:
>> Hi, there,
>>
>> I'd like to extract the lef
mri_extract_label aseg.mgz 17 53 hippo.mgz
On Wed, 16 Sep 2009, Guang Zeng
wrote:
>
> Hi, there,
>
> I'd like to extract the left and right hippocampus from aseg.mgz, so
> basically what I want is a volume where left hippocampus have value (or
> label) 17 and right hippocampus have value (or la
mri_binarize with --match 17 or --match 53 will do it
doug
Guang Zeng wrote:
> Hi, there,
>
> I'd like to extract the left and right hippocampus from aseg.mgz, so
> basically what I want is a volume where left hippocampus have value
> (or label) 17 and right hippocampus have value (or label) 53
