Defect-seg is what I was looking for. Thanks Bruce.
-Original Message-
From: Bruce Fischl [mailto:fis...@nmr.mgh.harvard.edu]
Sent: Saturday, 25 January 2014 12:36 AM
To: Chris Adamson
Cc: Freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] defect_labels to volume
have you tried
Have you tried running the defect-seg script? It creates annotations of
the defects. Look at the --help
doug
On 1/24/14 1:03 AM, Chris Adamson wrote:
Is there a way of making a volume like aparc+aseg with the defect
labels so that cortical region where the defects are show up red?
*Dr **C
have you tried mri_surf2vol?
On Fri, 24 Jan 2014, Chris Adamson wrote:
Is there a way of making a volume like aparc+aseg with the defect labels so
that cortical region where the defects are show up red?
Dr Chris Adamson
Research Officer, Developmental Imaging, Murdoch Childrens Research
I
