Re: [Freesurfer] convert gii to mgh/nii.gz (freesurfer surface)

2020-04-17 Thread Tim Schäfer
External Email - Use Caution You will need to convert it to FreeSurfer surface format (instead of MGH/NIFTI, which are volume formats), the standard one is the binary surface format. Assuming your file is 'lh.white.gii': mris_convert lh.white.gii lh.white or to use the less com

Re: [Freesurfer] convert gii to mgh/nii.gz (freesurfer surface)

2020-04-17 Thread Bruce Fischl
Hi Marina can you include command line and full screen output (in text!) so we can understand what you mean by "it doesn't work". Also, note that .mgh/.nii.gz are volume formats, not surface ones, so you can't convert a surface to them. You will need to use our surface format cheers Bruce On