Re: [Freesurfer] WMH-SynthSeg vs. SAMSEG for WM lesions

2024-01-05 Thread Stefano Cerri
External Email - Use Caution I've just exposed the option to the user. It might take some days before it will be available in the development version. @sudeepti: In the new development version, if you add to your samseg command the following flag "--do-not-use-shape-model", the le

Re: [Freesurfer] WMH-SynthSeg vs. SAMSEG for WM lesions

2024-01-05 Thread Koen Van Leemput
External Email - Use Caution Hi Stefano, For samseg isn't there also an option to disable the VAE shape model? I forgot the details, but if false positives are not an issue maybe that could also help? Koen On Friday, January 5, 2024, Stefano Cerri wrote: > External Ema