You can also use bbregister to register the CT to the anatomical. I'm
not sure what steps beyond that you'd need to do.
doug
On 10/29/14 10:47 PM, Zachary Greenberg wrote:
Rich,
You need SPM preferably (http://www.fil.ion.ucl.ac.uk/spm/) for
matlab, and freesurfer.
First run recon-all on
Thank you so much! This will take me some time, but i'll get back to you
when I get that far.
On Wed, October 29, 2014 9:47 pm, Zachary Greenberg wrote:
> Rich,
>
> You need SPM preferably (http://www.fil.ion.ucl.ac.uk/spm/) for matlab,
> and
> freesurfer.
>
> First run recon-all on the patients T
Rich,
You need SPM preferably (http://www.fil.ion.ucl.ac.uk/spm/) for matlab, and
freesurfer.
First run recon-all on the patients T1 (after acpc aligning in Spm). Then
take the resultant orig.mgz file (convert to .nii using mri_convert
orig.mgz orig.nii), and corregister the post-op CT to it usin
I have some post-op CT's for some of my patients but not all, do you have
a link or could you explain how to coregister so I can do it for the ones
I have? Thank you!
On Wed, October 29, 2014 9:18 pm, Zachary Greenberg wrote:
> Hi Rich,
>
> Do you have a post-operative CT scan of your ECoG patient
Hi Rich,
Do you have a post-operative CT scan of your ECoG patient? If you have that
and a high-res T1, you can get very accurate reconstruction of electrode
positions on the brain surface by corregistering the two.
-zack
On Wed, Oct 29, 2014 at 3:32 PM, rwlod...@uic.edu wrote:
> Hello my name
