Re: [Freesurfer] Variability in bedpostx output

2014-02-12 Thread Anastasia Yendiki
Wow, that's interesting. In both cases it's called with the default settings, without specifying any special options on the command line. You could verify this by running the respective versions of bedpostx independently of tracula and looking at the outputs. Unless of course something has cha

Re: [Freesurfer] Variability in bedpostx output

2014-02-12 Thread jwaugh
Thank you Anastasia. Unfortunately, I posted the question to the FSL list first and after a few go-rounds with clarification and more info, they felt like it was potentially a problem of the calls to the bedposts command from within Freesurfer. Their final assessment was that there should be n

Re: [Freesurfer] Variability in bedpostx output

2014-02-12 Thread Anastasia Yendiki
Hi Jeff - Questions about bedpostx output files are best addressed to the FSL list, as it's an FSL program that is not developped by us. The appropriate info to provide them is the FSL (rather than freesurfer) version numbers. a.y On Tue, 11 Feb 2014, jwa...@nmr.mgh.harvard.edu wrote: > Hell