Re: [Freesurfer] Resampling Question

2011-03-09 Thread Douglas N Greve
Well, .3mm is still 30%, which means that your brains will show up 30% smaller/larger. This could mess up any number of things. Unfortunately, the right answer is to fix your data then re-run everything. Try using FreeSurfer's mri_convert to convert from dicom. You can also just pass the dicom

Re: [Freesurfer] Resampling Question

2011-03-07 Thread Jeff Sadino
One more thing that might be useful: for my current dataset, everything was processed in FreeSurfer 4.3.1. Thank you, Jeff On Mon, Mar 7, 2011 at 12:41 PM, Jeff Sadino wrote: > Hello, > > I have a question about the effects of FreeSurfer's resampling algorithms. > The way our pipeline goes is t