Re: [Freesurfer] RB_all_2008-03-26.gca

2016-07-15 Thread Bruce Fischl
Hi Gabor if you upload a subject and let us know what you think is suboptimal (including voxel coords of inaccurate locations) we will take a look cheers Bruce On Fri, 15 Jul 2016, Gabor Perlaki wrote: Dear Bruce, Some subcortical structures seems to be suboptimally segmented in our subject

Re: [Freesurfer] RB_all_2008-03-26.gca

2016-07-15 Thread Gabor Perlaki
Dear Bruce, Some subcortical structures seems to be suboptimally segmented in our subjects. By looking at the original MRI intesities and labels of the atlas subjects individually we may suspect that the segmentation of these structures were also suboptimal in the atlas subjects (so the gca atlas

Re: [Freesurfer] RB_all_2008-03-26.gca

2016-07-14 Thread Bruce Fischl
Hi Gabor how would that be different from just looking at the aseg? cheers Bruce On Thu, 14 Jul 2016, Gabor Perlaki wrote: > Dear all, > > Is it possible somehow to visually inspect the segmentations of the > individual subjects used for the RB_all_2008-03-26.gca atlas? I can extract > the me