Hi Jorge
Thank you for your answer our question about CM. I worked so far and the
results are in line with glm_fit as you predicted.
If we would like to compare the groups (4th column in our qdec.table, with
(responder = 1), (non-responder = 2) coded) the CM.C would be [0 0 1 0] ?
We have unbal
I think it is CM.C = [0 1 0 0] if you want to test if the slope is
significantly different from 0. I also would say that for a dataset with only
two time points the results of lme will not probably be very different from
what you already got from mri_glmfit. lme is designed for more complex
un