Re: [Freesurfer] Pixel values in Brainstem segmentation {Disarmed}

2019-07-16 Thread Greve, Douglas N.,Ph.D.
mri_info --res file.mgz is probably better than mri_convert On 7/16/19 11:43 AM, Iglesias Gonzalez, Eugenio wrote: > > External Email - Use Caution > > Hi again, > > mri_convert will give you the voxel size, which is isotropic. Multiply > 2 of the dimensions and you’ve got the area. > > A

Re: [Freesurfer] Pixel values in Brainstem segmentation {Disarmed}

2019-07-16 Thread Iglesias Gonzalez, Eugenio
External Email - Use Caution Hi again, mri_convert will give you the voxel size, which is isotropic. Multiply 2 of the dimensions and you’ve got the area. Also: rather than counting pixels from the discrete segmentation, I highly recommend that you produce soft segmentations as e