Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-28 Thread Huang, Yujing
different problem now. Best, Yujing From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Huang, Yujing Sent: Thursday, April 28, 2022 10:00 AM To: Freesurfer support list Subject: Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error Hi Mateo, I’m glad mri_convert works for

Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-28 Thread Huang, Yujing
will see value maxed at 32766 for DT_UINT16. Is this what you were experiencing? Yujing From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Mateo Jean Sent: Thursday, April 28, 2022 6:06 AM To: freesurfer Subject: Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-28 Thread Mateo Jean
. How can I set mri_convert to convert values in signed- 16 bits ? Thank you for your previous answer !!! Best Regards, Mateo De: "Huang, Yujing" À: "freesurfer" Envoyé: Mercredi 27 Avril 2022 15:20:37 Objet: Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to

Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-27 Thread Huang, Yujing
fer Subject: Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error External Email - Use Caution Thank you for your answer. Even though I don't need the DTI values, I can't avoid this message : "ERROR: the number of frames * number of slices does not equal the nu

Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-27 Thread Mateo Jean
" Envoyé: Mardi 26 Avril 2022 21:22:28 Objet: Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error Hi Mateo, It looks like mri_convert terminated prematurely when you tried to convert those 512 dicom files. Those error messages are printed when mri_convert wasn’t able to

Re: [Freesurfer] Mri Convert Bruker MGRE files dicom to nii error

2022-04-26 Thread Huang, Yujing
Hi Mateo, It looks like mri_convert terminated prematurely when you tried to convert those 512 dicom files. Those error messages are printed when mri_convert wasn’t able to retrieve DTI information from dicom. If you don’t need the DTI values, you can ignore those error messages. Also, lookin