Re: [Freesurfer] MPRAGE intensity variations

2012-07-15 Thread Bruce Fischl
rd.edu] > Sent: Saturday, July 14, 2012 5:29 PM > To: Watson, Christopher > Cc: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] MPRAGE intensity variations > > Hi Chris > Are you using prescan normalize? It helps a lot > Cheers > Bruce > > > > On Jul 13, 2

Re: [Freesurfer] MPRAGE intensity variations

2012-07-14 Thread Watson, Christopher
Thanks, Chris From: Bruce Fischl [fis...@nmr.mgh.harvard.edu] Sent: Saturday, July 14, 2012 5:29 PM To: Watson, Christopher Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] MPRAGE intensity variations Hi Chris Are you using prescan normalize? It helps a lot Che

Re: [Freesurfer] MPRAGE intensity variations

2012-07-14 Thread Bruce Fischl
Hi Chris Are you using prescan normalize? It helps a lot Cheers Bruce On Jul 13, 2012, at 1:00 PM, Chris Watson wrote: > Hello, > I ran a subject through recon-all both with and without the "-mprage" flag, > and naturally got different results. I'm attaching a screenshot of the pial > and