the latter is easier than the former. You can use mri_convert with the
-rl flag ("reslice like"). From the subject's mri dir you could do:
mri_convert -rt nearest -rl rawavg.mz aseg.mgz aseg.orig_space.mgz
or
mri_convert -rl rawavg.mgz norm.mg norm.orig_space.mgz
where -rt nearest tells mri_c
Hi Bruce,
Thank you for the message. My image has isotropic voxel size 1mm3. Is there
a way where i can keep the original matrix size (256x256x160) instead of
re-sampling to (256x256x256)? or is there a way where i can resample the
data to my original matrix size after i run recon-all?
Thank you.
