Not sure what is going on. can you find (from the log) the command it
runs just before that (something with mris_label_calc) and run it in a
terminal (with the SUBJECT_DIR set etc). It could be that it get's
confused by the .nii extension, but could also be something else.
Martin
On 11/04/2
Heidi,
first: you probably need to keep the .nii in the table for now
(depending on how your cross sectional directories are really named?).
If they have the .nii extension, you need to do the same in the qdec table.
If down the road the extension creates problems, it will be very
complicate
Dear Heidi,
maybe there is a problem with your long.qdec.table.dat file? It is used
to create the .long. file names and obviously that
filename is wrong (containing two .long. in it). Make sure that the
first column is only the cross sectional id and the second one is the
base id, so in your
