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Hi Bruce,
Thank you so much for your reply!
I got it.
Sincerely
Haiyun
On Thu, Nov 10, 2022 at 5:08 PM Fischl, Bruce R.,PHD <
bfis...@mgh.harvard.edu> wrote:
> Hi Haiyun
>
>
>
> We reslice everything to coronal as part of the recon process. If you wa
Hi Haiyun
We reslice everything to coronal as part of the recon process. If you want to
map it back to the original orientation I think something like this should work:
mri_convert -rt nearest -rl rawavg.mgz aseg.mgz aseg.original_orientation.mgz
cheers
Bruce
From: freesurfer-boun...@nmr.mgh.
