Yes, based on the surfaces. We use Anderson Winkler's truncated pyramid
method.
On 10/22/2020 5:55 AM, Ian Hardingham wrote:
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>
> Hi Freesurfers,
>
> Is "total cortical gray matter volume" from aseg.stats calculated based
> on the recon-all Surfaces? Or usi
The volume between the surfaces is calculated
On 4/25/2020 2:56 AM, Ian Hardingham wrote:
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> Morning Freesurfers.
>
> Can you describe how the FS stat Total cortical gray matter volume is
> calculated from the files in the freesurfer subject directory? Is
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Ian,
You can use the mris_anatomical_stats command with the -b option. E.g.,
mris_anatomical_stats -b subjectid lh
will give you a tabular output containing the total gray matter volume in
the 3rd column:
128449 86239 *243375 *2.588 0.876 0.123
