Re: [Freesurfer] Hippocampal subfields total volume differences

2016-07-25 Thread Mojmír Vinkler
Wow, longitudinal segmentation is absolutely awesome! It reduced our measurement error by more than 30%. I can't wait when the hippocampal longitudinal segmentation is ready. By the way, I want to run (cross-sectional) hippocampal subfields on longitudinal data using additional T2 with lower resol

Re: [Freesurfer] Hippocampal subfields total volume differences

2016-07-15 Thread Iglesias, Eugenio
Dear Mojmir, using ~400 subjects, we found that the subfield module was a bit better than the ASEG volumes at discriminating Alzheimer’s patients from controls (see the Neuorimage paper). But, in any case, the difference is small. Regarding longitudinal segmentation: we just got a paper about thi

Re: [Freesurfer] Hippocampal subfields total volume differences

2016-07-15 Thread Mojmír Vinkler
Hi Juan, Thanks! You're right, they really are tightly correlated (although their absolute values differ by 30%). We tried it on couple of subjects, but didn't find subfields to be significantly better than aseg stats though. By the way, is Freesurfer capable of using multiple scans from the same

Re: [Freesurfer] Hippocampal subfields total volume differences

2016-07-13 Thread Iglesias, Eugenio
Hi Mojmir, ASEG typically gives a larger estimate of the volume, though highly correlated with that from the subfield package. We have found the measurements from the subfield package to be a bit more reliable, though. Cheers, Eugenio Juan Eugenio Iglesias Translational Imaging Group University