Re: [Freesurfer] HRF with derivatives: results

2022-06-09 Thread Laura Doll
External Email - Use Caution Good to know, thanks! Am Donnerstag, 09. Juni 2022 10:22 CEST, "Douglas N. Greve" schrieb: > Oh,  you're using a task regressor? That will not be convolved with the > HRF (or its derivative). The HRF/deriv only applies to paradigm files. > If y

Re: [Freesurfer] HRF with derivatives: results

2022-06-09 Thread Douglas N. Greve
Oh,  you're using a task regressor? That will not be convolved with the HRF (or its derivative). The HRF/deriv only applies to paradigm files. If you want that in your task regressor, you will have to do it yourself. On 6/7/2022 4:08 AM, Laura Doll wrote: > External Email - Use Caution

Re: [Freesurfer] HRF with derivatives: results

2022-06-07 Thread Laura Doll
External Email - Use Caution Yes, I think so. That would mean, that the additional frames correspond to the weights of the derivatives, right? But as I mentioned in the previous mail, they do have the same dimensions (in matlab, checking the beta.vol). Do you have any idea, wh

Re: [Freesurfer] HRF with derivatives: results

2022-06-03 Thread Douglas N. Greve
The -spmhrf 1 and 2 should have had additional frame in the beta.nii.gz. Is that what you are looking at? On 6/3/2022 4:51 AM, Laura Doll wrote: > External Email - Use Caution > > Okay, thanks. > But how can I find out the influence of the derivatives used? > I also tried to check the be

Re: [Freesurfer] HRF with derivatives: results

2022-06-03 Thread Laura Doll
External Email - Use Caution Okay, thanks. But how can I find out the influence of the derivatives used? I also tried to check the beta.nii.gz files for three different versions of the analysis (-spmhrf 0 1 and 2), assuming that the weights for the derivatives might be saved as

Re: [Freesurfer] HRF with derivatives: results

2022-06-01 Thread Douglas N. Greve
It uses the default parameters:   tau1 = 1;   tau2 = 1;   ttp1 = 5*tau1;  % 6 %   ttp2 = 15*tau1; % 16 %   c  = 1/6; On 6/1/2022 4:27 AM, Laura Doll wrote: > External Email - Use Caution > > Hi Doug, > > Thanks for your hint where to find the actual function. > But how can I find w

Re: [Freesurfer] HRF with derivatives: results

2022-06-01 Thread Laura Doll
External Email - Use Caution Hi Doug, Thanks for your hint where to find the actual function. But how can I find which values were used in my analysis? I.e. the input to this function? Best, Laura Am Dienstag, 31. Mai 2022 17:19 CEST, "Douglas N. Greve" schrieb: > Look he

Re: [Freesurfer] HRF with derivatives: results

2022-05-31 Thread Douglas N. Greve
Look here $FREESURFER/fsfast/toolbox/fast_spmhrf.m On 5/25/2022 9:19 AM, Laura Doll wrote: > External Email - Use Caution > > Hi everyone, > > I need some help regarding the SPM-HRF with two derivatives: > Where can I find the actual function that was used for the analysis? I am > mostly