Re: [Freesurfer] Freesurfer 8.0.0 version: gtmseg

2025-03-11 Thread Douglas N. Greve
Try adding --samseg to the command line On 3/8/2025 7:06 PM, Miguel Ángel Rivas Fernández wrote: External Email - Use Caution Dear Freesurfer developers, I have run the recon-all command with version 8.0.0 and now I would like to run the gtmseg command. However, I received the messa

Re: [Freesurfer] Freesurfer 8.0.0 version: gtmseg

2025-03-09 Thread fsbuild
External Email - Use Caution  I’m not familiar with the gtmseg command, but I think you can revert to the old recon-all behavior by setting FS_V8_XOPTS=0 on the recon-all command line.  That is listed under recon-all behavior at, https://secure-web.cisco.com/1sfWpao2icNI-saQsKdV