Hi Shane
I can't really tell from the image. YOu can try setting some of the
intensity bounds in mris_make_surfaces and mri_segment (eg. wlo, ghi and
such). If you upload the subject I'll take a look
cheers
Bruce
On Wed, 26 Apr 2017, Shane Schofield wrote:
Hi Bruce,
Thanks!
The -bigvent
Hi Bruce,
Thanks!
The -bigventricles flag worked like a charm! But I have now run into other
cases with fuzzy data and thin cortex that are not captured, such as the
picture below:
Any tips on filing them out?
Thank you.
On Sunday, April 23, 2017 3:41 PM, Bruce Fischl
wrote:
yes,
yes, that is correct. An alternative would be editing the aseg directly.
Editing the wm will help the surfaces but not correct the aseg.
But as Antonin suggests, try running with -bigventricles and see if that
fixes your problems
cheers
Bruce
On Sun, 23 Apr 2017, Shane Schofield wrote:
Th
