Re: [Freesurfer] Desikan Killiany Atlas measurements

2014-05-21 Thread Douglas N Greve
aparc.stats has all of the values (eg, thickness, area, volume, curv) for each ROI for a single subject. When you run aparcstats2table, you extract one of those for each subject for all ROIs and put them into a single table file On 05/21/2014 01:21 PM, Buse Merve Urgen wrote: > Thank you so mu

Re: [Freesurfer] Desikan Killiany Atlas measurements

2014-05-21 Thread Buse Merve Urgen
Thank you so much! Can I also learn what is the difference between the gray matter values in lh.aparc.stats file and the gray matter values from the command below; >> aparcstats2table --subjects S1 S2 S3 --hemi lh --meas >> volume--parc=aparc --tablefile aparc_lh_volume_table.txt > Thanks, --

Re: [Freesurfer] Desikan Killiany Atlas measurements

2014-05-21 Thread Douglas N Greve
mostly right, a few corrections below On 05/21/2014 10:35 AM, Buse Merve Ürgen wrote: > Dear all, > I want to get the measurements of meancurvature, thickness, white > matter volume and gray matter volume based on Desikan-Killiay Atlas. > I would like to learn whether the commands I used to get